Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 AC004408.2-201ENST00000623613 2777 ntBASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ECHDC3Q96DC8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 RNF126P1-202ENST00000569893 925 ntBASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ECHDC3Q96DC8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ECHDC3Q96DC8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.39■□□□□ 0.54
ECHDC3Q96DC8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ECHDC3Q96DC8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.39■□□□□ 0.54
ECHDC3Q96DC8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 KRT18P48-201ENST00000434763 852 ntBASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 AC011498.5-201ENST00000592027 486 ntBASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ECHDC3Q96DC8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 LINC01126-201ENST00000623515 1646 ntBASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 IGHGP-201ENST00000390555 1178 ntBASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 AP003733.1-201ENST00000491725 852 ntBASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 AC113404.2-201ENST00000507884 177 ntBASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 AC008687.5-201ENST00000593746 558 ntBASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC3Q96DC8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms