Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 KRT18P48-201ENST00000434763 852 ntBASIC19.42■□□□□ 0.7
ATP2A3Q93084 HCG4P8-203ENST00000443049 980 ntBASIC19.42■□□□□ 0.7
ATP2A3Q93084 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.42■□□□□ 0.7
ATP2A3Q93084 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ATP2A3Q93084 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.41■□□□□ 0.7
ATP2A3Q93084 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.41■□□□□ 0.7
ATP2A3Q93084 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.41■□□□□ 0.7
ATP2A3Q93084 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.41■□□□□ 0.7
ATP2A3Q93084 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ATP2A3Q93084 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 HBZP1-201ENST00000354915 429 ntBASIC19.4■□□□□ 0.7
ATP2A3Q93084 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 KRT126P-201ENST00000549467 1181 ntBASIC19.4■□□□□ 0.7
ATP2A3Q93084 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 AC024243.1-201ENST00000609234 778 ntBASIC19.4■□□□□ 0.7
ATP2A3Q93084 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
ATP2A3Q93084 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ATP2A3Q93084 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.39■□□□□ 0.7
ATP2A3Q93084 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ATP2A3Q93084 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A3Q93084 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATP2A3Q93084 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.39■□□□□ 0.69
ATP2A3Q93084 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms