Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC011467.2-201ENST00000598425 242 ntBASIC23.53■■□□□ 1.36
SMARCC1Q92922 AL138831.2-201ENST00000606564 490 ntBASIC23.53■■□□□ 1.36
SMARCC1Q92922 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCC1Q92922 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC1Q92922 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC1Q92922 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC1Q92922 AC125437.2-201ENST00000625180 2167 ntBASIC23.52■■□□□ 1.36
SMARCC1Q92922 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC1Q92922 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC1Q92922 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC1Q92922 AC009102.3-201ENST00000623118 1491 ntBASIC23.52■■□□□ 1.36
SMARCC1Q92922 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 AC021087.4-201ENST00000563761 564 ntBASIC23.52■■□□□ 1.36
SMARCC1Q92922 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCC1Q92922 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.52■■□□□ 1.35
SMARCC1Q92922 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 AP005117.1-201ENST00000584346 1413 ntBASIC23.51■■□□□ 1.35
SMARCC1Q92922 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC23.51■■□□□ 1.35
SMARCC1Q92922 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.51■■□□□ 1.35
SMARCC1Q92922 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.51■■□□□ 1.35
SMARCC1Q92922 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.51■■□□□ 1.35
SMARCC1Q92922 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.51■■□□□ 1.35
SMARCC1Q92922 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.51■■□□□ 1.35
SMARCC1Q92922 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC23.51■■□□□ 1.35
SMARCC1Q92922 FAM197Y3-203ENST00000618346 717 ntBASIC23.51■■□□□ 1.35
SMARCC1Q92922 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
SMARCC1Q92922 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC1Q92922 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 AC104109.2-201ENST00000602919 1418 ntBASIC23.5■■□□□ 1.35
SMARCC1Q92922 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 RBSN-204ENST00000449050 903 ntTSL 2 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 AC009154.2-201ENST00000621177 724 ntBASIC23.5■■□□□ 1.35
SMARCC1Q92922 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.5■■□□□ 1.35
SMARCC1Q92922 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 AL157384.1-201ENST00000445995 2473 ntBASIC23.5■■□□□ 1.35
SMARCC1Q92922 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC1Q92922 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC1Q92922 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC1Q92922 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC1Q92922 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC1Q92922 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 AL691403.2-201ENST00000618460 490 ntBASIC23.49■■□□□ 1.35
SMARCC1Q92922 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC1Q92922 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC1Q92922 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.49■■□□□ 1.35
SMARCC1Q92922 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC1Q92922 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC1Q92922 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms