Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SYNE2Q8WXH0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 GOLGA2P4-201ENST00000441462 777 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 TMPRSS11CP-201ENST00000453277 683 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AC009118.2-201ENST00000613275 655 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 RN7SL606P-201ENST00000472779 293 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AL139288.1-201ENST00000623748 933 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 GPS2P2-201ENST00000430745 888 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 DGCR5-201ENST00000399539 862 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 AC069335.1-201ENST00000489972 472 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 KRT19P2-202ENST00000557173 1012 ntBASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SYNE2Q8WXH0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 ANKRD19P-201ENST00000338192 862 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 KRT17P8-201ENST00000540749 863 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 AL390754.1-201ENST00000619088 582 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 BCAR1-209ENST00000546196 1340 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 AP006294.1-201ENST00000415407 339 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 AC011467.2-201ENST00000598425 242 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 AC148477.9-201ENST00000623974 539 ntBASIC7.41□□□□□ -1.22
SYNE2Q8WXH0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms