Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 AL121912.1-201ENST00000603683 238 ntBASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC28.33■■■□□ 2.13
CCNB3Q8WWL7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 AP000974.1-201ENST00000623909 2387 ntBASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CCNB3Q8WWL7 AL499627.1-201ENST00000569373 2188 ntBASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 BX323043.1-201ENST00000641006 1765 ntBASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 ANO7L1-203ENST00000602586 1720 ntBASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 TSPY12P-201ENST00000421279 868 ntBASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 VENTXP7-201ENST00000475503 772 ntBASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 GXYLT1P4-201ENST00000613576 1192 ntBASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CCNB3Q8WWL7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 MRPL3P1-201ENST00000400109 1033 ntBASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CCNB3Q8WWL7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 AP000593.1-201ENST00000393668 712 ntBASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 NUS1P2-201ENST00000417358 873 ntBASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 AC004263.2-201ENST00000617183 678 ntBASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CCNB3Q8WWL7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 AC018445.3-201ENST00000624177 1945 ntBASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 AL022342.1-201ENST00000400363 863 ntBASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 ABR-217ENST00000572441 563 ntTSL 4 BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 REXO1L6P-202ENST00000619970 1078 ntBASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
CCNB3Q8WWL7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms