Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 TSPY18P-201ENST00000441642 509 ntBASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SH3RF3Q8TEJ3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 AC104819.1-201ENST00000504587 486 ntBASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 ANO7L1-203ENST00000602586 1720 ntBASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SH3RF3Q8TEJ3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 IFNL4P1-201ENST00000607083 540 ntBASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SH3RF3Q8TEJ3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 IGHV3-47-201ENST00000425060 335 ntBASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 KRT17P6-201ENST00000453795 1220 ntBASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 AC111152.3-201ENST00000569699 673 ntBASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 AC138894.3-201ENST00000603787 634 ntBASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SH3RF3Q8TEJ3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.83■■□□□ 1.08
SH3RF3Q8TEJ3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.83■■□□□ 1.08
SH3RF3Q8TEJ3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
SH3RF3Q8TEJ3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3RF3Q8TEJ3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SH3RF3Q8TEJ3 LINC01126-201ENST00000623515 1646 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms