Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.6■□□□□ 0.57
CHD5Q8TDI0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 CHCHD2P8-201ENST00000429873 447 ntBASIC18.59■□□□□ 0.57
CHD5Q8TDI0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 AC005336.2-201ENST00000593183 939 ntBASIC18.59■□□□□ 0.57
CHD5Q8TDI0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHD5Q8TDI0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD5Q8TDI0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD5Q8TDI0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHD5Q8TDI0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHD5Q8TDI0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHD5Q8TDI0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 AC012615.1-201ENST00000565797 1299 ntBASIC18.58■□□□□ 0.56
CHD5Q8TDI0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.58■□□□□ 0.56
CHD5Q8TDI0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 PHGDH-209ENST00000641074 1780 ntBASIC18.58■□□□□ 0.56
CHD5Q8TDI0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHD5Q8TDI0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHD5Q8TDI0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHD5Q8TDI0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms