Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 AC083906.6-201ENST00000641366 219 ntBASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 KRT8P7-201ENST00000533003 1432 ntBASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 HOXB1-202ENST00000577092 1414 ntBASIC16.62■□□□□ 0.25
FNDC9Q8TBE3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 Z98044.1-201ENST00000632503 1764 ntBASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FNDC9Q8TBE3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
FNDC9Q8TBE3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 AL121956.5-201ENST00000625261 221 ntBASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FNDC9Q8TBE3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms