Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUP43Q8NFH3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NUP43Q8NFH3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NUP43Q8NFH3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NUP43Q8NFH3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.27■□□□□ 0.35
NUP43Q8NFH3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NUP43Q8NFH3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NUP43Q8NFH3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 KRT8P7-201ENST00000533003 1432 ntBASIC17.26■□□□□ 0.35
NUP43Q8NFH3 HOXB1-202ENST00000577092 1414 ntBASIC17.26■□□□□ 0.35
NUP43Q8NFH3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 AC135776.1-201ENST00000319817 2481 ntBASIC17.26■□□□□ 0.35
NUP43Q8NFH3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUP43Q8NFH3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 AL163051.1-201ENST00000569214 1512 ntBASIC17.25■□□□□ 0.35
NUP43Q8NFH3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUP43Q8NFH3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.24■□□□□ 0.35
NUP43Q8NFH3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms