Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 SPDYE13P-201ENST00000445314 798 ntBASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 AL136038.3-201ENST00000561909 1096 ntBASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAM1L1Q8N609 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 MIR662-201ENST00000384847 95 ntBASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 VENTXP5-201ENST00000523979 775 ntBASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAM1L1Q8N609 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 AC099343.3-201ENST00000605834 2503 ntBASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 FAM86EP-206ENST00000510506 987 ntBASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 AC008687.5-201ENST00000593746 558 ntBASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 AC024563.2-201ENST00000603282 481 ntBASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAM1L1Q8N609 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms