Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC65Q8IXS2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC65Q8IXS2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 ECEL1P3-201ENST00000427961 737 ntBASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 AC009065.1-201ENST00000564055 1225 ntBASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 NEK4P2-201ENST00000580004 1012 ntBASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC65Q8IXS2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 AC009102.3-201ENST00000623118 1491 ntBASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 MIR149-201ENST00000384879 89 ntBASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 SLC25A3P1-201ENST00000443844 931 ntBASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 MIR3180-4-201ENST00000582223 153 ntBASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC65Q8IXS2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
CCDC65Q8IXS2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC65Q8IXS2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 AP000523.1-201ENST00000398242 1049 ntBASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.44■□□□□ 0.86
CCDC65Q8IXS2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms