Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C11orf88Q6PI97 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 AC023632.3-201ENST00000521633 145 ntBASIC16.07■□□□□ 0.16
C11orf88Q6PI97 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 FAM197Y4-202ENST00000622692 608 ntBASIC16.07■□□□□ 0.16
C11orf88Q6PI97 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
C11orf88Q6PI97 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 POM121L13P-201ENST00000422362 380 ntBASIC16.06■□□□□ 0.16
C11orf88Q6PI97 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.06■□□□□ 0.16
C11orf88Q6PI97 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 SOX15-203ENST00000570788 1093 ntBASIC16.06■□□□□ 0.16
C11orf88Q6PI97 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 AL359736.2-201ENST00000621992 437 ntBASIC16.06■□□□□ 0.16
C11orf88Q6PI97 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C11orf88Q6PI97 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 AC063926.3-201ENST00000624734 5658 ntBASIC16.05■□□□□ 0.16
C11orf88Q6PI97 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C11orf88Q6PI97 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms