Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC62Q6P9F0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC62Q6P9F0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC62Q6P9F0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 IGHV3-47-201ENST00000425060 335 ntBASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 KRT18P31-201ENST00000506277 1292 ntBASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 AL121772.3-201ENST00000610840 674 ntBASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC62Q6P9F0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 EMBP1-201ENST00000458200 901 ntBASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 AC104819.1-201ENST00000504587 486 ntBASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 AC091304.2-201ENST00000564639 760 ntBASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC62Q6P9F0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 GUSBP12-201ENST00000513727 720 ntBASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 AC074051.2-201ENST00000565115 352 ntBASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 AP005901.3-202ENST00000581653 237 ntBASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 AC124864.1-201ENST00000623408 392 ntBASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC62Q6P9F0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC62Q6P9F0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms