Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.64■□□□□ 0.25
RTL6Q6ICC9 AL391807.1-203ENST00000604392 2365 ntBASIC16.64■□□□□ 0.25
RTL6Q6ICC9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL6Q6ICC9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL6Q6ICC9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL6Q6ICC9 AL162741.1-201ENST00000565563 1558 ntBASIC16.64■□□□□ 0.25
RTL6Q6ICC9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL6Q6ICC9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL6Q6ICC9 AC016734.2-201ENST00000624325 1377 ntBASIC16.64■□□□□ 0.25
RTL6Q6ICC9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL6Q6ICC9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 AL136038.4-201ENST00000603606 1261 ntBASIC16.63■□□□□ 0.25
RTL6Q6ICC9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL6Q6ICC9 AL138781.2-201ENST00000617896 1843 ntBASIC16.63■□□□□ 0.25
RTL6Q6ICC9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 MIR662-201ENST00000384847 95 ntBASIC16.62■□□□□ 0.25
RTL6Q6ICC9 MIR564-202ENST00000385049 94 ntBASIC16.62■□□□□ 0.25
RTL6Q6ICC9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 TSSC2-201ENST00000450217 709 ntBASIC16.62■□□□□ 0.25
RTL6Q6ICC9 AC104390.1-201ENST00000555663 520 ntBASIC16.62■□□□□ 0.25
RTL6Q6ICC9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
RTL6Q6ICC9 HOXB1-202ENST00000577092 1414 ntBASIC16.62■□□□□ 0.25
RTL6Q6ICC9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 AC141586.3-201ENST00000562166 1838 ntBASIC16.61■□□□□ 0.25
RTL6Q6ICC9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 BX276092.5-203ENST00000456199 560 ntBASIC16.61■□□□□ 0.25
RTL6Q6ICC9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
RTL6Q6ICC9 MIR3180-1-201ENST00000580374 94 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms