Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.94■□□□□ 0.62
ALFQ53S48 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.94■□□□□ 0.62
ALFQ53S48 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ALFQ53S48 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALFQ53S48 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.94■□□□□ 0.62
ALFQ53S48 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ALFQ53S48 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.94■□□□□ 0.62
ALFQ53S48 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.94■□□□□ 0.62
ALFQ53S48 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.94■□□□□ 0.62
ALFQ53S48 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.94■□□□□ 0.62
ALFQ53S48 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
ALFQ53S48 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
ALFQ53S48 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALFQ53S48 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.94■□□□□ 0.62
ALFQ53S48 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
ALFQ53S48 AL138781.2-201ENST00000617896 1843 ntBASIC18.94■□□□□ 0.62
ALFQ53S48 AL391807.1-203ENST00000604392 2365 ntBASIC18.94■□□□□ 0.62
ALFQ53S48 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ALFQ53S48 SDHAP2-201ENST00000455183 2001 ntBASIC18.94■□□□□ 0.62
ALFQ53S48 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.94■□□□□ 0.62
ALFQ53S48 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.94■□□□□ 0.62
ALFQ53S48 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ALFQ53S48 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.94■□□□□ 0.62
ALFQ53S48 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALFQ53S48 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALFQ53S48 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALFQ53S48 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALFQ53S48 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.93■□□□□ 0.62
ALFQ53S48 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALFQ53S48 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 VENTXP5-201ENST00000523979 775 ntBASIC18.93■□□□□ 0.62
ALFQ53S48 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.93■□□□□ 0.62
ALFQ53S48 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.93■□□□□ 0.62
ALFQ53S48 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ALFQ53S48 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.93■□□□□ 0.62
ALFQ53S48 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 AL136038.4-201ENST00000603606 1261 ntBASIC18.93■□□□□ 0.62
ALFQ53S48 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.93■□□□□ 0.62
ALFQ53S48 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ALFQ53S48 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALFQ53S48 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.93■□□□□ 0.62
ALFQ53S48 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ALFQ53S48 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
ALFQ53S48 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ALFQ53S48 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.92■□□□□ 0.62
ALFQ53S48 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ALFQ53S48 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.92■□□□□ 0.62
ALFQ53S48 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ALFQ53S48 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.92■□□□□ 0.62
ALFQ53S48 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 AC009102.3-201ENST00000623118 1491 ntBASIC18.92■□□□□ 0.62
ALFQ53S48 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ALFQ53S48 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.92■□□□□ 0.62
ALFQ53S48 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.92■□□□□ 0.62
ALFQ53S48 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
ALFQ53S48 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 MIR149-201ENST00000384879 89 ntBASIC18.92■□□□□ 0.62
ALFQ53S48 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 HLA-F-220ENST00000434407 884 ntBASIC18.92■□□□□ 0.62
ALFQ53S48 PVRIG2P-201ENST00000435460 978 ntBASIC18.92■□□□□ 0.62
ALFQ53S48 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.92■□□□□ 0.62
ALFQ53S48 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.92■□□□□ 0.62
ALFQ53S48 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ALFQ53S48 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ALFQ53S48 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ALFQ53S48 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.91■□□□□ 0.62
ALFQ53S48 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms