Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 KRT8P41-201ENST00000533985 1514 ntBASIC16.51■□□□□ 0.23
CCDC58Q4VC31 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 KRT8P32-201ENST00000512863 1461 ntBASIC16.51■□□□□ 0.23
CCDC58Q4VC31 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 PRKY-204ENST00000533551 1019 ntBASIC16.51■□□□□ 0.23
CCDC58Q4VC31 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 ESPNP-201ENST00000270691 2015 ntBASIC16.51■□□□□ 0.23
CCDC58Q4VC31 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC58Q4VC31 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 KRT8P45-201ENST00000414328 1447 ntBASIC16.5■□□□□ 0.23
CCDC58Q4VC31 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 AL499627.1-201ENST00000569373 2188 ntBASIC16.5■□□□□ 0.23
CCDC58Q4VC31 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.5■□□□□ 0.23
CCDC58Q4VC31 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 SIRPAP1-201ENST00000448467 1770 ntBASIC16.49■□□□□ 0.23
CCDC58Q4VC31 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 GNAS-203ENST00000306120 1878 ntBASIC16.49■□□□□ 0.23
CCDC58Q4VC31 AC135776.1-201ENST00000319817 2481 ntBASIC16.49■□□□□ 0.23
CCDC58Q4VC31 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 AC006970.2-201ENST00000450065 779 ntBASIC16.49■□□□□ 0.23
CCDC58Q4VC31 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.49■□□□□ 0.23
CCDC58Q4VC31 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms