Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 AL162741.1-201ENST00000565563 1558 ntBASIC20.98■□□□□ 0.95
LONRF3Q496Y0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 AC128688.1-201ENST00000487626 519 ntBASIC20.98■□□□□ 0.95
LONRF3Q496Y0 DUX4L26-201ENST00000489078 1255 ntBASIC20.98■□□□□ 0.95
LONRF3Q496Y0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 AC006011.2-201ENST00000621313 1158 ntBASIC20.98■□□□□ 0.95
LONRF3Q496Y0 AL590326.2-201ENST00000625139 305 ntBASIC20.98■□□□□ 0.95
LONRF3Q496Y0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LONRF3Q496Y0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 NTF6B-201ENST00000591913 560 ntBASIC20.97■□□□□ 0.95
LONRF3Q496Y0 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.97■□□□□ 0.95
LONRF3Q496Y0 AC096733.2-201ENST00000609937 1394 ntBASIC20.97■□□□□ 0.95
LONRF3Q496Y0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 WWOX-216ENST00000569818 525 ntBASIC20.96■□□□□ 0.95
LONRF3Q496Y0 MYC-208ENST00000641036 567 ntBASIC20.96■□□□□ 0.95
LONRF3Q496Y0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 LETM1P2-201ENST00000597330 2178 ntBASIC20.96■□□□□ 0.95
LONRF3Q496Y0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LONRF3Q496Y0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.95■□□□□ 0.95
LONRF3Q496Y0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
LONRF3Q496Y0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LONRF3Q496Y0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms