Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.82□□□□□ -0.04
PAX9P55771 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PAX9P55771 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.82□□□□□ -0.04
PAX9P55771 TNRC18P3-201ENST00000441896 2691 ntBASIC14.82□□□□□ -0.04
PAX9P55771 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.82□□□□□ -0.04
PAX9P55771 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.82□□□□□ -0.04
PAX9P55771 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
PAX9P55771 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PAX9P55771 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 NBPF21P-201ENST00000425093 1451 ntBASIC14.82□□□□□ -0.04
PAX9P55771 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.82□□□□□ -0.04
PAX9P55771 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PAX9P55771 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.81□□□□□ -0.04
PAX9P55771 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.81□□□□□ -0.04
PAX9P55771 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.81□□□□□ -0.04
PAX9P55771 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PAX9P55771 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PAX9P55771 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 GUSBP6-202ENST00000438529 1198 ntBASIC14.81□□□□□ -0.04
PAX9P55771 TSPY6P-201ENST00000448518 926 ntBASIC14.81□□□□□ -0.04
PAX9P55771 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.81□□□□□ -0.04
PAX9P55771 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.81□□□□□ -0.04
PAX9P55771 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.81□□□□□ -0.04
PAX9P55771 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.81□□□□□ -0.04
PAX9P55771 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
PAX9P55771 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.81□□□□□ -0.04
PAX9P55771 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PAX9P55771 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PAX9P55771 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PAX9P55771 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX9P55771 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PAX9P55771 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX9P55771 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PAX9P55771 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
PAX9P55771 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PAX9P55771 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.8□□□□□ -0.04
PAX9P55771 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 PRSS44-201ENST00000515154 1146 ntBASIC14.8□□□□□ -0.04
PAX9P55771 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.8□□□□□ -0.04
PAX9P55771 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
PAX9P55771 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 GMCL1P1-201ENST00000463439 1581 ntBASIC14.8□□□□□ -0.04
PAX9P55771 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PAX9P55771 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PAX9P55771 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms