Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC4P55056 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC4P55056 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC4P55056 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC4P55056 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC4P55056 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
APOC4P55056 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.52□□□□□ -0.24
APOC4P55056 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC4P55056 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.52□□□□□ -0.24
APOC4P55056 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
APOC4P55056 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC4P55056 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOC4P55056 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
APOC4P55056 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.52□□□□□ -0.24
APOC4P55056 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOC4P55056 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC4P55056 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 KRT18P48-201ENST00000434763 852 ntBASIC13.52□□□□□ -0.25
APOC4P55056 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.52□□□□□ -0.25
APOC4P55056 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.52□□□□□ -0.25
APOC4P55056 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC4P55056 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 MTMR9LP-203ENST00000426597 1545 ntBASIC13.52□□□□□ -0.25
APOC4P55056 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOC4P55056 AC093525.10-201ENST00000625130 1569 ntBASIC13.52□□□□□ -0.25
APOC4P55056 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOC4P55056 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.52□□□□□ -0.25
APOC4P55056 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC4P55056 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.52□□□□□ -0.25
APOC4P55056 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 AC116562.4-201ENST00000641316 2276 ntBASIC13.52□□□□□ -0.25
APOC4P55056 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.52□□□□□ -0.25
APOC4P55056 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.52□□□□□ -0.25
APOC4P55056 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
APOC4P55056 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOC4P55056 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC4P55056 AL162741.1-201ENST00000565563 1558 ntBASIC13.51□□□□□ -0.25
APOC4P55056 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
APOC4P55056 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC4P55056 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC4P55056 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC4P55056 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC4P55056 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
APOC4P55056 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC4P55056 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC4P55056 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APOC4P55056 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC4P55056 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC4P55056 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC4P55056 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC4P55056 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC4P55056 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC4P55056 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC4P55056 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC4P55056 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC4P55056 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
APOC4P55056 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC4P55056 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC4P55056 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC4P55056 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.5□□□□□ -0.25
APOC4P55056 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms