Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.53■■□□□ 1.2
PDE1AP54750 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.53■■□□□ 1.2
PDE1AP54750 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE1AP54750 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE1AP54750 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.53■■□□□ 1.2
PDE1AP54750 AC141257.4-201ENST00000634557 245 ntBASIC22.53■■□□□ 1.2
PDE1AP54750 AC136944.6-201ENST00000634818 245 ntBASIC22.53■■□□□ 1.2
PDE1AP54750 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PDE1AP54750 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE1AP54750 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.53■■□□□ 1.2
PDE1AP54750 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 GMCL1P1-201ENST00000463439 1581 ntBASIC22.53■■□□□ 1.2
PDE1AP54750 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.53■■□□□ 1.2
PDE1AP54750 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE1AP54750 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.53■■□□□ 1.2
PDE1AP54750 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.53■■□□□ 1.2
PDE1AP54750 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PDE1AP54750 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.52■■□□□ 1.2
PDE1AP54750 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.52■■□□□ 1.2
PDE1AP54750 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PDE1AP54750 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PDE1AP54750 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.52■■□□□ 1.2
PDE1AP54750 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
PDE1AP54750 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.19
PDE1AP54750 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE1AP54750 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.51■■□□□ 1.19
PDE1AP54750 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.51■■□□□ 1.19
PDE1AP54750 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.51■■□□□ 1.19
PDE1AP54750 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
PDE1AP54750 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PDE1AP54750 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
PDE1AP54750 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE1AP54750 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PDE1AP54750 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PDE1AP54750 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC22.51■■□□□ 1.19
PDE1AP54750 PHGDH-209ENST00000641074 1780 ntBASIC22.5■■□□□ 1.19
PDE1AP54750 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.5■■□□□ 1.19
PDE1AP54750 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
PDE1AP54750 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
PDE1AP54750 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 LINC01126-201ENST00000623515 1646 ntBASIC22.5■■□□□ 1.19
PDE1AP54750 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
PDE1AP54750 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.5■■□□□ 1.19
PDE1AP54750 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
PDE1AP54750 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.5■■□□□ 1.19
PDE1AP54750 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PDE1AP54750 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDE1AP54750 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDE1AP54750 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.49■■□□□ 1.19
PDE1AP54750 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PDE1AP54750 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PDE1AP54750 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PDE1AP54750 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PDE1AP54750 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PDE1AP54750 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms