Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PHGDH-209ENST00000641074 1780 ntBASIC20.31■□□□□ 0.84
PMS1P54277 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMS1P54277 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
PMS1P54277 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.3■□□□□ 0.84
PMS1P54277 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PMS1P54277 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.3■□□□□ 0.84
PMS1P54277 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PMS1P54277 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
PMS1P54277 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.3■□□□□ 0.84
PMS1P54277 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PMS1P54277 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 TSPY17P-201ENST00000450329 467 ntBASIC20.3■□□□□ 0.84
PMS1P54277 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.3■□□□□ 0.84
PMS1P54277 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.3■□□□□ 0.84
PMS1P54277 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PMS1P54277 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.3■□□□□ 0.84
PMS1P54277 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.3■□□□□ 0.84
PMS1P54277 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PMS1P54277 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.3■□□□□ 0.84
PMS1P54277 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMS1P54277 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS1P54277 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS1P54277 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 AL096828.2-201ENST00000567259 1965 ntBASIC20.29■□□□□ 0.84
PMS1P54277 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.29■□□□□ 0.84
PMS1P54277 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS1P54277 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS1P54277 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 WWOX-216ENST00000569818 525 ntBASIC20.29■□□□□ 0.84
PMS1P54277 MIR4497-201ENST00000583208 89 ntBASIC20.29■□□□□ 0.84
PMS1P54277 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS1P54277 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.29■□□□□ 0.84
PMS1P54277 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PMS1P54277 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PMS1P54277 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.29■□□□□ 0.84
PMS1P54277 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
PMS1P54277 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.29■□□□□ 0.84
PMS1P54277 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PMS1P54277 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PMS1P54277 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PMS1P54277 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.29■□□□□ 0.84
PMS1P54277 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PMS1P54277 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 HOXB1-202ENST00000577092 1414 ntBASIC20.28■□□□□ 0.84
PMS1P54277 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.28■□□□□ 0.84
PMS1P54277 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.28■□□□□ 0.84
PMS1P54277 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.28■□□□□ 0.84
PMS1P54277 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PMS1P54277 AC138028.4-201ENST00000564984 1845 ntBASIC20.28■□□□□ 0.84
PMS1P54277 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
PMS1P54277 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.28■□□□□ 0.84
PMS1P54277 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.28■□□□□ 0.84
PMS1P54277 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.28■□□□□ 0.84
PMS1P54277 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.28■□□□□ 0.84
PMS1P54277 AP006294.2-201ENST00000641667 209 ntBASIC20.28■□□□□ 0.84
PMS1P54277 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PMS1P54277 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.28■□□□□ 0.84
PMS1P54277 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.28■□□□□ 0.84
PMS1P54277 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PMS1P54277 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.27■□□□□ 0.84
PMS1P54277 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.27■□□□□ 0.84
PMS1P54277 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.27■□□□□ 0.84
PMS1P54277 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PMS1P54277 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms