Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.9■□□□□ 0.46
PDX1P52945 AL512353.2-201ENST00000448759 1962 ntBASIC17.9■□□□□ 0.46
PDX1P52945 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PDX1P52945 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.9■□□□□ 0.46
PDX1P52945 FAAHP1-202ENST00000446499 1238 ntBASIC17.9■□□□□ 0.46
PDX1P52945 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.9■□□□□ 0.46
PDX1P52945 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.9■□□□□ 0.46
PDX1P52945 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.9■□□□□ 0.46
PDX1P52945 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 AL732292.2-201ENST00000609649 430 ntBASIC17.9■□□□□ 0.46
PDX1P52945 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PDX1P52945 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PDX1P52945 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.9■□□□□ 0.46
PDX1P52945 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PDX1P52945 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.9■□□□□ 0.46
PDX1P52945 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
PDX1P52945 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDX1P52945 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PDX1P52945 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PDX1P52945 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDX1P52945 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDX1P52945 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDX1P52945 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.89■□□□□ 0.45
PDX1P52945 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDX1P52945 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDX1P52945 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.89■□□□□ 0.45
PDX1P52945 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDX1P52945 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.89■□□□□ 0.45
PDX1P52945 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.89■□□□□ 0.45
PDX1P52945 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.89■□□□□ 0.45
PDX1P52945 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.89■□□□□ 0.45
PDX1P52945 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDX1P52945 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDX1P52945 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PDX1P52945 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDX1P52945 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDX1P52945 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDX1P52945 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
PDX1P52945 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDX1P52945 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDX1P52945 KRT8P10-201ENST00000450021 1447 ntBASIC17.89■□□□□ 0.45
PDX1P52945 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDX1P52945 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
PDX1P52945 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 AL049812.1-201ENST00000432563 2267 ntBASIC17.88■□□□□ 0.45
PDX1P52945 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.88■□□□□ 0.45
PDX1P52945 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.88■□□□□ 0.45
PDX1P52945 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.88■□□□□ 0.45
PDX1P52945 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PDX1P52945 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.88■□□□□ 0.45
PDX1P52945 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.88■□□□□ 0.45
PDX1P52945 TSPY19P-201ENST00000418461 509 ntBASIC17.88■□□□□ 0.45
PDX1P52945 KRT18P23-201ENST00000435622 1283 ntBASIC17.88■□□□□ 0.45
PDX1P52945 AP000347.1-202ENST00000435868 847 ntBASIC17.88■□□□□ 0.45
PDX1P52945 TSPY18P-201ENST00000441642 509 ntBASIC17.88■□□□□ 0.45
PDX1P52945 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PDX1P52945 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.88■□□□□ 0.45
PDX1P52945 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.88■□□□□ 0.45
PDX1P52945 AC010240.3-201ENST00000607688 395 ntBASIC17.88■□□□□ 0.45
PDX1P52945 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDX1P52945 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.88■□□□□ 0.45
PDX1P52945 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.88■□□□□ 0.45
PDX1P52945 HOXB1-202ENST00000577092 1414 ntBASIC17.88■□□□□ 0.45
PDX1P52945 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.88■□□□□ 0.45
PDX1P52945 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.88■□□□□ 0.45
PDX1P52945 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.88■□□□□ 0.45
PDX1P52945 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDX1P52945 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDX1P52945 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.87■□□□□ 0.45
PDX1P52945 AC004408.2-201ENST00000623613 2777 ntBASIC17.87■□□□□ 0.45
PDX1P52945 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 RNF165-205ENST00000588679 2904 ntBASIC17.87■□□□□ 0.45
PDX1P52945 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDX1P52945 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms