Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR9P51686 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 RNA5SP413-201ENST00000516373 109 ntBASIC16.26■□□□□ 0.19
CCR9P51686 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.26■□□□□ 0.19
CCR9P51686 AC026271.3-201ENST00000571884 352 ntBASIC16.26■□□□□ 0.19
CCR9P51686 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR9P51686 AL109659.2-201ENST00000606809 1674 ntBASIC16.26■□□□□ 0.19
CCR9P51686 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCR9P51686 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCR9P51686 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CCR9P51686 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.26■□□□□ 0.19
CCR9P51686 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCR9P51686 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCR9P51686 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCR9P51686 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.25■□□□□ 0.19
CCR9P51686 OR6D1P-202ENST00000641007 5290 ntBASIC16.25■□□□□ 0.19
CCR9P51686 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCR9P51686 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.25■□□□□ 0.19
CCR9P51686 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 AL355802.2-201ENST00000402069 882 ntBASIC16.25■□□□□ 0.19
CCR9P51686 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CCR9P51686 AP002982.1-201ENST00000492365 877 ntBASIC16.25■□□□□ 0.19
CCR9P51686 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.25■□□□□ 0.19
CCR9P51686 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.25■□□□□ 0.19
CCR9P51686 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CCR9P51686 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.25■□□□□ 0.19
CCR9P51686 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCR9P51686 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.25■□□□□ 0.19
CCR9P51686 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.25■□□□□ 0.19
CCR9P51686 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.25■□□□□ 0.19
CCR9P51686 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
CCR9P51686 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCR9P51686 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 AC106820.2-201ENST00000563775 3264 ntBASIC16.25■□□□□ 0.19
CCR9P51686 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCR9P51686 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCR9P51686 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCR9P51686 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.24■□□□□ 0.19
CCR9P51686 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.24■□□□□ 0.19
CCR9P51686 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.24■□□□□ 0.19
CCR9P51686 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.24■□□□□ 0.19
CCR9P51686 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
CCR9P51686 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
CCR9P51686 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.24■□□□□ 0.19
CCR9P51686 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.24■□□□□ 0.19
CCR9P51686 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCR9P51686 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.23■□□□□ 0.19
CCR9P51686 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CCR9P51686 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCR9P51686 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.23■□□□□ 0.19
CCR9P51686 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCR9P51686 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCR9P51686 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCR9P51686 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CCR9P51686 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CCR9P51686 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCR9P51686 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCR9P51686 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCR9P51686 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCR9P51686 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms