Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF144AP50876 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.16■□□□□ 0.34
RNF144AP50876 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF144AP50876 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 AC010947.1-201ENST00000623454 693 ntBASIC17.16■□□□□ 0.34
RNF144AP50876 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 BICD1-207ENST00000551848 1962 ntBASIC17.16■□□□□ 0.34
RNF144AP50876 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF144AP50876 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF144AP50876 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF144AP50876 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF144AP50876 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF144AP50876 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF144AP50876 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
RNF144AP50876 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF144AP50876 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RNF144AP50876 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF144AP50876 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF144AP50876 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF144AP50876 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF144AP50876 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNF144AP50876 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RNF144AP50876 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF144AP50876 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RNF144AP50876 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RNF144AP50876 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF144AP50876 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF144AP50876 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF144AP50876 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 MMP23A-201ENST00000234610 1017 ntBASIC17.14■□□□□ 0.33
RNF144AP50876 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF144AP50876 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.14■□□□□ 0.33
RNF144AP50876 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF144AP50876 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF144AP50876 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.14■□□□□ 0.33
RNF144AP50876 ECEL1P2-202ENST00000465689 757 ntBASIC17.14■□□□□ 0.33
RNF144AP50876 AL023803.3-201ENST00000615559 522 ntBASIC17.14■□□□□ 0.33
RNF144AP50876 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF144AP50876 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RNF144AP50876 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RNF144AP50876 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF144AP50876 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF144AP50876 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RNF144AP50876 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF144AP50876 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF144AP50876 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF144AP50876 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RNF144AP50876 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF144AP50876 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
RNF144AP50876 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF144AP50876 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms