Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
GDNFP39905 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.08■□□□□ 0.16
GDNFP39905 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
GDNFP39905 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
GDNFP39905 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.08■□□□□ 0.16
GDNFP39905 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
GDNFP39905 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.07■□□□□ 0.16
GDNFP39905 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
GDNFP39905 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
GDNFP39905 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
GDNFP39905 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
GDNFP39905 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.07■□□□□ 0.16
GDNFP39905 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.07■□□□□ 0.16
GDNFP39905 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.07■□□□□ 0.16
GDNFP39905 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.07■□□□□ 0.16
GDNFP39905 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.07■□□□□ 0.16
GDNFP39905 MTDHP1-201ENST00000605323 784 ntBASIC16.07■□□□□ 0.16
GDNFP39905 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GDNFP39905 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.07■□□□□ 0.16
GDNFP39905 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.07■□□□□ 0.16
GDNFP39905 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.07■□□□□ 0.16
GDNFP39905 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
GDNFP39905 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.07■□□□□ 0.16
GDNFP39905 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.07■□□□□ 0.16
GDNFP39905 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.07■□□□□ 0.16
GDNFP39905 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GDNFP39905 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.07■□□□□ 0.16
GDNFP39905 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GDNFP39905 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 AL499627.1-201ENST00000569373 2188 ntBASIC16.06■□□□□ 0.16
GDNFP39905 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.06■□□□□ 0.16
GDNFP39905 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GDNFP39905 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.06■□□□□ 0.16
GDNFP39905 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 KRT17P3-201ENST00000420566 1262 ntBASIC16.06■□□□□ 0.16
GDNFP39905 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.06■□□□□ 0.16
GDNFP39905 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
GDNFP39905 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.06■□□□□ 0.16
GDNFP39905 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.06■□□□□ 0.16
GDNFP39905 AC006058.3-201ENST00000606217 1069 ntBASIC16.06■□□□□ 0.16
GDNFP39905 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.06■□□□□ 0.16
GDNFP39905 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
GDNFP39905 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.06■□□□□ 0.16
GDNFP39905 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.06■□□□□ 0.16
GDNFP39905 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GDNFP39905 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GDNFP39905 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.05■□□□□ 0.16
GDNFP39905 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GDNFP39905 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
GDNFP39905 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms