Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA3P32297 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.46■□□□□ 0.71
CHRNA3P32297 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 MFAP1P1-201ENST00000442257 1255 ntBASIC19.46■□□□□ 0.71
CHRNA3P32297 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.46■□□□□ 0.71
CHRNA3P32297 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 KRT18P21-201ENST00000515767 1272 ntBASIC19.46■□□□□ 0.71
CHRNA3P32297 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.46■□□□□ 0.71
CHRNA3P32297 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.46■□□□□ 0.71
CHRNA3P32297 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CHRNA3P32297 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CHRNA3P32297 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 KRT8P32-201ENST00000512863 1461 ntBASIC19.46■□□□□ 0.71
CHRNA3P32297 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 KRT18P22-201ENST00000402024 1347 ntBASIC19.46■□□□□ 0.71
CHRNA3P32297 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA3P32297 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CHRNA3P32297 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA3P32297 AC096733.2-201ENST00000609937 1394 ntBASIC19.45■□□□□ 0.7
CHRNA3P32297 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA3P32297 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHRNA3P32297 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA3P32297 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA3P32297 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA3P32297 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CHRNA3P32297 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA3P32297 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA3P32297 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHRNA3P32297 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA3P32297 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA3P32297 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA3P32297 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.45■□□□□ 0.7
CHRNA3P32297 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.45■□□□□ 0.7
CHRNA3P32297 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHRNA3P32297 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA3P32297 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA3P32297 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA3P32297 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CHRNA3P32297 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA3P32297 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA3P32297 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA3P32297 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CHRNA3P32297 AC112777.1-201ENST00000540175 1423 ntBASIC19.44■□□□□ 0.7
CHRNA3P32297 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CHRNA3P32297 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.44■□□□□ 0.7
CHRNA3P32297 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHRNA3P32297 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA3P32297 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA3P32297 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CHRNA3P32297 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.44■□□□□ 0.7
CHRNA3P32297 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHRNA3P32297 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHRNA3P32297 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.44■□□□□ 0.7
CHRNA3P32297 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHRNA3P32297 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNA3P32297 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CHRNA3P32297 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHRNA3P32297 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNA3P32297 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.43■□□□□ 0.7
CHRNA3P32297 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA3P32297 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNA3P32297 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNA3P32297 AC020916.1-201ENST00000587762 1774 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms