Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 AL163051.1-201ENST00000569214 1512 ntBASIC18.63■□□□□ 0.57
HLA-DPA1P20036 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.63■□□□□ 0.57
HLA-DPA1P20036 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DPA1P20036 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 AC020763.4-201ENST00000623414 4170 ntBASIC18.62■□□□□ 0.57
HLA-DPA1P20036 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DPA1P20036 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 AL162741.1-201ENST00000565563 1558 ntBASIC18.61■□□□□ 0.57
HLA-DPA1P20036 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 AL138966.2-201ENST00000621997 464 ntBASIC18.61■□□□□ 0.57
HLA-DPA1P20036 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DPA1P20036 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.6■□□□□ 0.57
HLA-DPA1P20036 MIR149-201ENST00000384879 89 ntBASIC18.6■□□□□ 0.57
HLA-DPA1P20036 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 LIN28AP1-201ENST00000429574 405 ntBASIC18.6■□□□□ 0.57
HLA-DPA1P20036 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.6■□□□□ 0.57
HLA-DPA1P20036 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 AC005363.2-201ENST00000618631 242 ntBASIC18.6■□□□□ 0.57
HLA-DPA1P20036 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DPA1P20036 AC141257.4-201ENST00000634557 245 ntBASIC18.6■□□□□ 0.57
HLA-DPA1P20036 AC136944.6-201ENST00000634818 245 ntBASIC18.6■□□□□ 0.57
HLA-DPA1P20036 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms