Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
KRT4P19013 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT4P19013 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT4P19013 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT4P19013 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT4P19013 FLJ13224-201ENST00000313737 1514 ntBASIC18.54■□□□□ 0.56
KRT4P19013 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.54■□□□□ 0.56
KRT4P19013 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KRT4P19013 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT4P19013 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KRT4P19013 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT4P19013 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT4P19013 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT4P19013 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.53■□□□□ 0.56
KRT4P19013 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT4P19013 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.53■□□□□ 0.56
KRT4P19013 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.53■□□□□ 0.56
KRT4P19013 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KRT4P19013 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.53■□□□□ 0.56
KRT4P19013 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 RCC2P3-201ENST00000418112 1537 ntBASIC18.53■□□□□ 0.56
KRT4P19013 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KRT4P19013 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT4P19013 HTR7P1-201ENST00000538670 1336 ntBASIC18.52■□□□□ 0.56
KRT4P19013 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT4P19013 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.52■□□□□ 0.56
KRT4P19013 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
KRT4P19013 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT4P19013 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.52■□□□□ 0.56
KRT4P19013 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT4P19013 AC133041.1-202ENST00000642053 222 ntBASIC18.52■□□□□ 0.56
KRT4P19013 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT4P19013 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT4P19013 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT4P19013 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.52■□□□□ 0.55
KRT4P19013 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.52■□□□□ 0.55
KRT4P19013 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
KRT4P19013 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT4P19013 AC012317.2-201ENST00000623305 2251 ntBASIC18.52■□□□□ 0.55
KRT4P19013 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
KRT4P19013 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT4P19013 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KRT4P19013 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT4P19013 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
KRT4P19013 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT4P19013 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 AC069152.1-201ENST00000438030 544 ntBASIC18.51■□□□□ 0.55
KRT4P19013 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT4P19013 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT4P19013 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KRT4P19013 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT4P19013 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms