Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.22■□□□□ 0.19
ATF1P18846 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ATF1P18846 REXO1L9P-201ENST00000604264 2108 ntBASIC16.22■□□□□ 0.19
ATF1P18846 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.22■□□□□ 0.19
ATF1P18846 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.22■□□□□ 0.19
ATF1P18846 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.22■□□□□ 0.19
ATF1P18846 AL645608.8-201ENST00000606034 2086 ntBASIC16.22■□□□□ 0.19
ATF1P18846 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ATF1P18846 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ATF1P18846 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.21■□□□□ 0.19
ATF1P18846 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 KRT8P11-201ENST00000409686 1436 ntBASIC16.21■□□□□ 0.19
ATF1P18846 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
ATF1P18846 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.21■□□□□ 0.19
ATF1P18846 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
ATF1P18846 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.21■□□□□ 0.19
ATF1P18846 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.21■□□□□ 0.19
ATF1P18846 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ATF1P18846 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.21■□□□□ 0.19
ATF1P18846 RN7SL471P-201ENST00000580476 299 ntBASIC16.21■□□□□ 0.19
ATF1P18846 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ATF1P18846 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.21■□□□□ 0.19
ATF1P18846 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
ATF1P18846 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.21■□□□□ 0.19
ATF1P18846 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ATF1P18846 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.21■□□□□ 0.18
ATF1P18846 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATF1P18846 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ATF1P18846 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.21■□□□□ 0.18
ATF1P18846 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ATF1P18846 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.2■□□□□ 0.18
ATF1P18846 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
ATF1P18846 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ATF1P18846 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ATF1P18846 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.2■□□□□ 0.18
ATF1P18846 PRSS44-201ENST00000515154 1146 ntBASIC16.2■□□□□ 0.18
ATF1P18846 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ATF1P18846 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.2■□□□□ 0.18
ATF1P18846 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.2■□□□□ 0.18
ATF1P18846 MYC-208ENST00000641036 567 ntBASIC16.2■□□□□ 0.18
ATF1P18846 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ATF1P18846 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.2■□□□□ 0.18
ATF1P18846 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ATF1P18846 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ATF1P18846 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATF1P18846 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 AC080080.1-201ENST00000625121 2420 ntBASIC16.19■□□□□ 0.18
ATF1P18846 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ATF1P18846 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF1P18846 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF1P18846 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.19■□□□□ 0.18
ATF1P18846 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ATF1P18846 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.19■□□□□ 0.18
ATF1P18846 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.19■□□□□ 0.18
ATF1P18846 NIFKP9-201ENST00000419265 221 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms