Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CD28P10747 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
CD28P10747 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CD28P10747 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.42□□□□□ -0.1
CD28P10747 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.42□□□□□ -0.1
CD28P10747 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.42□□□□□ -0.1
CD28P10747 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.42□□□□□ -0.1
CD28P10747 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.42□□□□□ -0.1
CD28P10747 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CD28P10747 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.42□□□□□ -0.1
CD28P10747 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
CD28P10747 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.42□□□□□ -0.1
CD28P10747 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CD28P10747 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.41□□□□□ -0.1
CD28P10747 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 Z83836.1-201ENST00000624605 1642 ntBASIC14.41□□□□□ -0.1
CD28P10747 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.41□□□□□ -0.1
CD28P10747 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 LINC00265-3P-201ENST00000447588 903 ntBASIC14.41□□□□□ -0.1
CD28P10747 AP003733.1-201ENST00000491725 852 ntBASIC14.41□□□□□ -0.1
CD28P10747 AP000867.3-201ENST00000524675 377 ntBASIC14.41□□□□□ -0.1
CD28P10747 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.41□□□□□ -0.1
CD28P10747 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CD28P10747 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CD28P10747 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.41□□□□□ -0.1
CD28P10747 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
CD28P10747 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD28P10747 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CD28P10747 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.41□□□□□ -0.1
CD28P10747 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CD28P10747 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CD28P10747 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CD28P10747 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CD28P10747 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD28P10747 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.4□□□□□ -0.1
CD28P10747 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.4□□□□□ -0.1
CD28P10747 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CD28P10747 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.4□□□□□ -0.1
CD28P10747 PVRIG2P-201ENST00000435460 978 ntBASIC14.4□□□□□ -0.1
CD28P10747 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.4□□□□□ -0.1
CD28P10747 AC005332.3-201ENST00000589904 676 ntBASIC14.4□□□□□ -0.1
CD28P10747 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.4□□□□□ -0.1
CD28P10747 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.4□□□□□ -0.1
CD28P10747 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms