Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBCP0CG48 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
UBCP0CG48 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBCP0CG48 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.2■□□□□ 0.18
UBCP0CG48 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
UBCP0CG48 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.2■□□□□ 0.18
UBCP0CG48 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UBCP0CG48 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.2■□□□□ 0.18
UBCP0CG48 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.2■□□□□ 0.18
UBCP0CG48 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.2■□□□□ 0.18
UBCP0CG48 AC006058.3-201ENST00000606217 1069 ntBASIC16.2■□□□□ 0.18
UBCP0CG48 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.2■□□□□ 0.18
UBCP0CG48 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.2■□□□□ 0.18
UBCP0CG48 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.2■□□□□ 0.18
UBCP0CG48 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
UBCP0CG48 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBCP0CG48 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.19■□□□□ 0.18
UBCP0CG48 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UBCP0CG48 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
UBCP0CG48 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.19■□□□□ 0.18
UBCP0CG48 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
UBCP0CG48 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
UBCP0CG48 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.19■□□□□ 0.18
UBCP0CG48 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UBCP0CG48 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.19■□□□□ 0.18
UBCP0CG48 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.19■□□□□ 0.18
UBCP0CG48 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 CR392000.1-201ENST00000624770 1228 ntBASIC16.19■□□□□ 0.18
UBCP0CG48 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
UBCP0CG48 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.19■□□□□ 0.18
UBCP0CG48 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 AC008556.1-201ENST00000610908 2040 ntBASIC16.19■□□□□ 0.18
UBCP0CG48 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
UBCP0CG48 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
UBCP0CG48 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.19■□□□□ 0.18
UBCP0CG48 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBCP0CG48 AC008764.6-201ENST00000595909 2069 ntBASIC16.18■□□□□ 0.18
UBCP0CG48 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
UBCP0CG48 AC093677.2-201ENST00000600169 1863 ntBASIC16.18■□□□□ 0.18
UBCP0CG48 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UBCP0CG48 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBCP0CG48 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBCP0CG48 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBCP0CG48 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBCP0CG48 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 AP000593.1-201ENST00000393668 712 ntBASIC16.18■□□□□ 0.18
UBCP0CG48 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 AC073195.1-201ENST00000607241 877 ntBASIC16.18■□□□□ 0.18
UBCP0CG48 AC139713.2-201ENST00000641328 2723 ntBASIC16.18■□□□□ 0.18
UBCP0CG48 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBCP0CG48 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBCP0CG48 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
UBCP0CG48 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
UBCP0CG48 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UBCP0CG48 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBCP0CG48 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBCP0CG48 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.18■□□□□ 0.18
UBCP0CG48 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
UBCP0CG48 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms