Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.34■□□□□ 0.05
CTSDP07339 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CTSDP07339 NBPF21P-201ENST00000425093 1451 ntBASIC15.33■□□□□ 0.05
CTSDP07339 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.33■□□□□ 0.05
CTSDP07339 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CTSDP07339 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CTSDP07339 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.33■□□□□ 0.05
CTSDP07339 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CTSDP07339 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CTSDP07339 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.33■□□□□ 0.04
CTSDP07339 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.33■□□□□ 0.04
CTSDP07339 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CTSDP07339 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.33■□□□□ 0.04
CTSDP07339 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.33■□□□□ 0.04
CTSDP07339 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.33■□□□□ 0.04
CTSDP07339 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CTSDP07339 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.33■□□□□ 0.04
CTSDP07339 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.33■□□□□ 0.04
CTSDP07339 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.33■□□□□ 0.04
CTSDP07339 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
CTSDP07339 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CTSDP07339 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CTSDP07339 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CTSDP07339 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTSDP07339 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.32■□□□□ 0.04
CTSDP07339 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 MIR4758-201ENST00000577688 71 ntBASIC15.32■□□□□ 0.04
CTSDP07339 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 AL096828.2-201ENST00000567259 1965 ntBASIC15.32■□□□□ 0.04
CTSDP07339 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTSDP07339 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.32■□□□□ 0.04
CTSDP07339 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.32■□□□□ 0.04
CTSDP07339 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTSDP07339 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSDP07339 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.31■□□□□ 0.04
CTSDP07339 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTSDP07339 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms