Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DPB1P04440 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 MYC-208ENST00000641036 567 ntBASIC16.6■□□□□ 0.25
HLA-DPB1P04440 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.6■□□□□ 0.25
HLA-DPB1P04440 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DPB1P04440 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 AC012313.1-201ENST00000593393 3059 ntBASIC16.59■□□□□ 0.25
HLA-DPB1P04440 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.59■□□□□ 0.25
HLA-DPB1P04440 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 AC138028.4-201ENST00000564984 1845 ntBASIC16.59■□□□□ 0.25
HLA-DPB1P04440 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPB1P04440 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPB1P04440 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.58■□□□□ 0.24
HLA-DPB1P04440 KRT16P5-201ENST00000455284 522 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms