Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 RCC2P3-201ENST00000418112 1537 ntBASIC16.6■□□□□ 0.25
HLA-DQA2P01906 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 FAM197Y1-201ENST00000421178 764 ntBASIC16.6■□□□□ 0.25
HLA-DQA2P01906 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 AL357033.4-201ENST00000617703 1807 ntBASIC16.6■□□□□ 0.25
HLA-DQA2P01906 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 AL135905.2-201ENST00000584934 1404 ntBASIC16.6■□□□□ 0.25
HLA-DQA2P01906 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA2P01906 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 AL354751.1-201ENST00000412768 1863 ntBASIC16.59■□□□□ 0.25
HLA-DQA2P01906 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 TSPY20P-201ENST00000450910 630 ntBASIC16.59■□□□□ 0.25
HLA-DQA2P01906 AC011506.1-201ENST00000474329 610 ntBASIC16.59■□□□□ 0.25
HLA-DQA2P01906 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 AC130371.2-201ENST00000619443 611 ntBASIC16.59■□□□□ 0.25
HLA-DQA2P01906 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 FSCN1P1-201ENST00000568912 1481 ntBASIC16.59■□□□□ 0.25
HLA-DQA2P01906 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DQA2P01906 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.58■□□□□ 0.25
HLA-DQA2P01906 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA2P01906 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA2P01906 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA2P01906 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DQA2P01906 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 AC008040.2-201ENST00000461049 708 ntBASIC16.58■□□□□ 0.24
HLA-DQA2P01906 B3GAT3P1-201ENST00000471720 806 ntBASIC16.58■□□□□ 0.24
HLA-DQA2P01906 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
HLA-DQA2P01906 ITM2C-210ENST00000620962 501 ntBASIC16.58■□□□□ 0.24
HLA-DQA2P01906 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms