Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBC1P01850 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBC1P01850 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBC1P01850 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBC1P01850 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 AC099343.3-201ENST00000605834 2503 ntBASIC18.46■□□□□ 0.55
TRBC1P01850 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.46■□□□□ 0.55
TRBC1P01850 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBC1P01850 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.46■□□□□ 0.55
TRBC1P01850 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBC1P01850 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
TRBC1P01850 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRBC1P01850 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBC1P01850 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
TRBC1P01850 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRBC1P01850 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRBC1P01850 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRBC1P01850 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
TRBC1P01850 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TRBC1P01850 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
TRBC1P01850 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBC1P01850 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRBC1P01850 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.45■□□□□ 0.54
TRBC1P01850 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.45■□□□□ 0.54
TRBC1P01850 AL671277.2-201ENST00000458060 996 ntBASIC18.45■□□□□ 0.54
TRBC1P01850 AC092597.1-201ENST00000487352 616 ntBASIC18.45■□□□□ 0.54
TRBC1P01850 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.45■□□□□ 0.54
TRBC1P01850 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBC1P01850 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBC1P01850 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRBC1P01850 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.45■□□□□ 0.54
TRBC1P01850 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBC1P01850 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRBC1P01850 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRBC1P01850 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 AL391807.1-203ENST00000604392 2365 ntBASIC18.44■□□□□ 0.54
TRBC1P01850 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
TRBC1P01850 HBZP1-201ENST00000354915 429 ntBASIC18.44■□□□□ 0.54
TRBC1P01850 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBC1P01850 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRBC1P01850 HLA-F-220ENST00000434407 884 ntBASIC18.44■□□□□ 0.54
TRBC1P01850 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.44■□□□□ 0.54
TRBC1P01850 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.44■□□□□ 0.54
TRBC1P01850 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.44■□□□□ 0.54
TRBC1P01850 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.44■□□□□ 0.54
TRBC1P01850 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.44■□□□□ 0.54
TRBC1P01850 AL136038.4-201ENST00000603606 1261 ntBASIC18.44■□□□□ 0.54
TRBC1P01850 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.44■□□□□ 0.54
TRBC1P01850 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBC1P01850 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBC1P01850 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRBC1P01850 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBC1P01850 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.44■□□□□ 0.54
TRBC1P01850 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.44■□□□□ 0.54
TRBC1P01850 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
TRBC1P01850 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBC1P01850 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms