Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.33□□□□□ -0.6
HERC2O95714 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
HERC2O95714 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.33□□□□□ -0.6
HERC2O95714 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
HERC2O95714 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.33□□□□□ -0.6
HERC2O95714 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
HERC2O95714 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC11.33□□□□□ -0.6
HERC2O95714 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.33□□□□□ -0.6
HERC2O95714 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.33□□□□□ -0.6
HERC2O95714 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 AC020928.2-201ENST00000588717 2197 ntBASIC11.33□□□□□ -0.6
HERC2O95714 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
HERC2O95714 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC11.33□□□□□ -0.6
HERC2O95714 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HERC2O95714 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HERC2O95714 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC11.33□□□□□ -0.6
HERC2O95714 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
HERC2O95714 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.32□□□□□ -0.6
HERC2O95714 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 AC068472.1-201ENST00000474589 881 ntBASIC11.32□□□□□ -0.6
HERC2O95714 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC11.32□□□□□ -0.6
HERC2O95714 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.32□□□□□ -0.6
HERC2O95714 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC11.32□□□□□ -0.6
HERC2O95714 AC138969.3-201ENST00000546612 1459 ntBASIC11.32□□□□□ -0.6
HERC2O95714 AC138932.2-201ENST00000548268 1459 ntBASIC11.32□□□□□ -0.6
HERC2O95714 AC126755.4-201ENST00000549796 1459 ntBASIC11.32□□□□□ -0.6
HERC2O95714 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC11.32□□□□□ -0.6
HERC2O95714 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 AL022326.1-202ENST00000641533 845 ntBASIC11.32□□□□□ -0.6
HERC2O95714 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC11.32□□□□□ -0.6
HERC2O95714 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 AC106886.1-201ENST00000568660 600 ntBASIC11.32□□□□□ -0.6
HERC2O95714 MIR4259-201ENST00000584466 101 ntBASIC11.32□□□□□ -0.6
HERC2O95714 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.32□□□□□ -0.6
HERC2O95714 AC099568.2-201ENST00000609194 695 ntBASIC11.32□□□□□ -0.6
HERC2O95714 COX11-210ENST00000639671 696 ntBASIC11.32□□□□□ -0.6
HERC2O95714 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 AC008556.1-201ENST00000610908 2040 ntBASIC11.32□□□□□ -0.6
HERC2O95714 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
HERC2O95714 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
HERC2O95714 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC11.32□□□□□ -0.6
HERC2O95714 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HERC2O95714 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.32□□□□□ -0.6
HERC2O95714 AC084121.4-201ENST00000641598 221 ntBASIC11.32□□□□□ -0.6
HERC2O95714 AF228730.8-201ENST00000642140 221 ntBASIC11.32□□□□□ -0.6
HERC2O95714 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
HERC2O95714 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HERC2O95714 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.31□□□□□ -0.6
HERC2O95714 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC11.31□□□□□ -0.6
HERC2O95714 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
HERC2O95714 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC11.31□□□□□ -0.6
HERC2O95714 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.31□□□□□ -0.6
HERC2O95714 SPDYE21P-201ENST00000413323 827 ntBASIC11.31□□□□□ -0.6
HERC2O95714 BNIP3P42-201ENST00000454982 569 ntBASIC11.31□□□□□ -0.6
HERC2O95714 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.31□□□□□ -0.6
HERC2O95714 COG4-212ENST00000564653 590 ntTSL 5 BASIC11.31□□□□□ -0.6
HERC2O95714 BNIP3P29-201ENST00000598302 571 ntBASIC11.31□□□□□ -0.6
HERC2O95714 AC011447.5-201ENST00000616168 564 ntBASIC11.31□□□□□ -0.6
HERC2O95714 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.31□□□□□ -0.6
HERC2O95714 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
HERC2O95714 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms