Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.22■□□□□ 0.19
KDM4BO94953 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.22■□□□□ 0.19
KDM4BO94953 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.22■□□□□ 0.19
KDM4BO94953 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.22■□□□□ 0.19
KDM4BO94953 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.22■□□□□ 0.19
KDM4BO94953 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.22■□□□□ 0.19
KDM4BO94953 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
KDM4BO94953 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 AL139384.1-201ENST00000612143 3047 ntBASIC16.22■□□□□ 0.19
KDM4BO94953 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.22■□□□□ 0.19
KDM4BO94953 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.22■□□□□ 0.19
KDM4BO94953 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.22■□□□□ 0.19
KDM4BO94953 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.22■□□□□ 0.19
KDM4BO94953 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.22■□□□□ 0.19
KDM4BO94953 AC008764.6-201ENST00000595909 2069 ntBASIC16.22■□□□□ 0.19
KDM4BO94953 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.22■□□□□ 0.19
KDM4BO94953 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KDM4BO94953 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.21■□□□□ 0.19
KDM4BO94953 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.21■□□□□ 0.19
KDM4BO94953 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 PKD1P5-201ENST00000532415 10291 ntBASIC16.21■□□□□ 0.19
KDM4BO94953 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KDM4BO94953 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KDM4BO94953 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KDM4BO94953 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KDM4BO94953 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
KDM4BO94953 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.21■□□□□ 0.19
KDM4BO94953 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.21■□□□□ 0.19
KDM4BO94953 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.21■□□□□ 0.19
KDM4BO94953 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.21■□□□□ 0.19
KDM4BO94953 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.21■□□□□ 0.19
KDM4BO94953 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
KDM4BO94953 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KDM4BO94953 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
KDM4BO94953 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
KDM4BO94953 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KDM4BO94953 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.2■□□□□ 0.18
KDM4BO94953 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.2■□□□□ 0.18
KDM4BO94953 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
KDM4BO94953 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.2■□□□□ 0.18
KDM4BO94953 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
KDM4BO94953 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
KDM4BO94953 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KDM4BO94953 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.2■□□□□ 0.18
KDM4BO94953 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.2■□□□□ 0.18
KDM4BO94953 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.2■□□□□ 0.18
KDM4BO94953 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.2■□□□□ 0.18
KDM4BO94953 AC233263.1-201ENST00000578059 224 ntBASIC16.2■□□□□ 0.18
KDM4BO94953 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.2■□□□□ 0.18
KDM4BO94953 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
KDM4BO94953 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.2■□□□□ 0.18
KDM4BO94953 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
KDM4BO94953 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.2■□□□□ 0.18
KDM4BO94953 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.2■□□□□ 0.18
KDM4BO94953 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KDM4BO94953 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms