Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CNOT3O75175 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT3O75175 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT3O75175 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CNOT3O75175 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
CNOT3O75175 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT3O75175 COX11P1-201ENST00000489116 835 ntBASIC17.89■□□□□ 0.45
CNOT3O75175 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT3O75175 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.89■□□□□ 0.45
CNOT3O75175 AC011558.1-201ENST00000623459 338 ntBASIC17.89■□□□□ 0.45
CNOT3O75175 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.89■□□□□ 0.45
CNOT3O75175 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CNOT3O75175 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.89■□□□□ 0.45
CNOT3O75175 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNOT3O75175 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT3O75175 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNOT3O75175 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT3O75175 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 RNF152P1-201ENST00000397754 604 ntBASIC17.88■□□□□ 0.45
CNOT3O75175 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT3O75175 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT3O75175 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CNOT3O75175 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT3O75175 AC008622.2-201ENST00000617006 1229 ntBASIC17.88■□□□□ 0.45
CNOT3O75175 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT3O75175 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT3O75175 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT3O75175 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT3O75175 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.88■□□□□ 0.45
CNOT3O75175 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT3O75175 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNOT3O75175 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT3O75175 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.88■□□□□ 0.45
CNOT3O75175 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CNOT3O75175 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.87■□□□□ 0.45
CNOT3O75175 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CNOT3O75175 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.87■□□□□ 0.45
CNOT3O75175 FAM8A6P-201ENST00000407496 1135 ntBASIC17.87■□□□□ 0.45
CNOT3O75175 TSPY21P-201ENST00000433481 731 ntBASIC17.87■□□□□ 0.45
CNOT3O75175 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 AL023973.1-201ENST00000624619 620 ntBASIC17.87■□□□□ 0.45
CNOT3O75175 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CNOT3O75175 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CNOT3O75175 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNOT3O75175 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.87■□□□□ 0.45
CNOT3O75175 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CNOT3O75175 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT3O75175 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms