Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CTNND1O60716 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 MIR149-201ENST00000384879 89 ntBASIC21.52■■□□□ 1.04
CTNND1O60716 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.52■■□□□ 1.04
CTNND1O60716 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.52■■□□□ 1.04
CTNND1O60716 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CTNND1O60716 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.52■■□□□ 1.04
CTNND1O60716 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.52■■□□□ 1.04
CTNND1O60716 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.52■■□□□ 1.04
CTNND1O60716 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CTNND1O60716 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
CTNND1O60716 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.51■■□□□ 1.03
CTNND1O60716 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CTNND1O60716 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.51■■□□□ 1.03
CTNND1O60716 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.51■■□□□ 1.03
CTNND1O60716 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CTNND1O60716 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.51■■□□□ 1.03
CTNND1O60716 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.51■■□□□ 1.03
CTNND1O60716 AC008687.5-201ENST00000593746 558 ntBASIC21.51■■□□□ 1.03
CTNND1O60716 BNIP3P18-201ENST00000593976 575 ntBASIC21.51■■□□□ 1.03
CTNND1O60716 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CTNND1O60716 AC064862.7-201ENST00000604520 867 ntBASIC21.51■■□□□ 1.03
CTNND1O60716 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.51■■□□□ 1.03
CTNND1O60716 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.51■■□□□ 1.03
CTNND1O60716 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.51■■□□□ 1.03
CTNND1O60716 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CTNND1O60716 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CTNND1O60716 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTNND1O60716 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTNND1O60716 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTNND1O60716 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
CTNND1O60716 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.5■■□□□ 1.03
CTNND1O60716 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTNND1O60716 TSPY12P-201ENST00000421279 868 ntBASIC21.5■■□□□ 1.03
CTNND1O60716 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.5■■□□□ 1.03
CTNND1O60716 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CTNND1O60716 MIR5100-201ENST00000579544 119 ntBASIC21.5■■□□□ 1.03
CTNND1O60716 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
CTNND1O60716 BX640515.1-201ENST00000617215 977 ntBASIC21.5■■□□□ 1.03
CTNND1O60716 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CTNND1O60716 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTNND1O60716 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.5■■□□□ 1.03
CTNND1O60716 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.5■■□□□ 1.03
CTNND1O60716 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.5■■□□□ 1.03
CTNND1O60716 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTNND1O60716 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CTNND1O60716 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.5■■□□□ 1.03
CTNND1O60716 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CTNND1O60716 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.49■■□□□ 1.03
CTNND1O60716 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CTNND1O60716 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CTNND1O60716 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.49■■□□□ 1.03
CTNND1O60716 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CTNND1O60716 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.49■■□□□ 1.03
CTNND1O60716 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.49■■□□□ 1.03
CTNND1O60716 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.49■■□□□ 1.03
CTNND1O60716 AL591684.3-201ENST00000605187 298 ntBASIC21.49■■□□□ 1.03
CTNND1O60716 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.49■■□□□ 1.03
CTNND1O60716 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CTNND1O60716 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CTNND1O60716 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CTNND1O60716 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CTNND1O60716 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms