Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19■□□□□ 0.63
TSPAN3O60637 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 AL163051.1-201ENST00000569214 1512 ntBASIC19■□□□□ 0.63
TSPAN3O60637 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN3O60637 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TSPAN3O60637 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.99■□□□□ 0.63
TSPAN3O60637 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.99■□□□□ 0.63
TSPAN3O60637 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.99■□□□□ 0.63
TSPAN3O60637 KRT18P41-201ENST00000518924 1277 ntBASIC18.99■□□□□ 0.63
TSPAN3O60637 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.99■□□□□ 0.63
TSPAN3O60637 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.99■□□□□ 0.63
TSPAN3O60637 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.99■□□□□ 0.63
TSPAN3O60637 MIR3180-4-201ENST00000582223 153 ntBASIC18.99■□□□□ 0.63
TSPAN3O60637 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.99■□□□□ 0.63
TSPAN3O60637 AC011498.5-201ENST00000592027 486 ntBASIC18.99■□□□□ 0.63
TSPAN3O60637 AC069148.1-201ENST00000608741 768 ntBASIC18.99■□□□□ 0.63
TSPAN3O60637 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TSPAN3O60637 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.99■□□□□ 0.63
TSPAN3O60637 AP000974.1-201ENST00000623909 2387 ntBASIC18.99■□□□□ 0.63
TSPAN3O60637 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TSPAN3O60637 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TSPAN3O60637 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.99■□□□□ 0.63
TSPAN3O60637 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 AC005082.1-201ENST00000413042 2259 ntBASIC18.98■□□□□ 0.63
TSPAN3O60637 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.98■□□□□ 0.63
TSPAN3O60637 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 MIR662-201ENST00000384847 95 ntBASIC18.98■□□□□ 0.63
TSPAN3O60637 AP000593.1-201ENST00000393668 712 ntBASIC18.98■□□□□ 0.63
TSPAN3O60637 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.98■□□□□ 0.63
TSPAN3O60637 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.98■□□□□ 0.63
TSPAN3O60637 RNF126P1-202ENST00000569893 925 ntBASIC18.98■□□□□ 0.63
TSPAN3O60637 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.98■□□□□ 0.63
TSPAN3O60637 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.98■□□□□ 0.63
TSPAN3O60637 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.98■□□□□ 0.63
TSPAN3O60637 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
TSPAN3O60637 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TSPAN3O60637 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TSPAN3O60637 AC098818.2-201ENST00000564925 2320 ntBASIC18.97■□□□□ 0.63
TSPAN3O60637 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN3O60637 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN3O60637 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TSPAN3O60637 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.97■□□□□ 0.63
TSPAN3O60637 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.97■□□□□ 0.63
TSPAN3O60637 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.97■□□□□ 0.63
TSPAN3O60637 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.97■□□□□ 0.63
TSPAN3O60637 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.97■□□□□ 0.63
TSPAN3O60637 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN3O60637 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN3O60637 MYLKP1-201ENST00000509077 1580 ntBASIC18.97■□□□□ 0.63
TSPAN3O60637 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN3O60637 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TSPAN3O60637 ANO7L1-203ENST00000602586 1720 ntBASIC18.97■□□□□ 0.63
TSPAN3O60637 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.97■□□□□ 0.63
TSPAN3O60637 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TSPAN3O60637 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TSPAN3O60637 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.96■□□□□ 0.63
TSPAN3O60637 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TSPAN3O60637 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TSPAN3O60637 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms