Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.6■□□□□ 0.57
SMAD6O43541 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.6■□□□□ 0.57
SMAD6O43541 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 KRT18P48-201ENST00000434763 852 ntBASIC18.6■□□□□ 0.57
SMAD6O43541 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.6■□□□□ 0.57
SMAD6O43541 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMAD6O43541 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.6■□□□□ 0.57
SMAD6O43541 AC005332.3-201ENST00000589904 676 ntBASIC18.6■□□□□ 0.57
SMAD6O43541 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.6■□□□□ 0.57
SMAD6O43541 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMAD6O43541 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMAD6O43541 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
SMAD6O43541 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.6■□□□□ 0.57
SMAD6O43541 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.6■□□□□ 0.57
SMAD6O43541 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMAD6O43541 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 AC004408.2-201ENST00000623613 2777 ntBASIC18.59■□□□□ 0.57
SMAD6O43541 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 AL024508.2-201ENST00000607749 1894 ntBASIC18.59■□□□□ 0.57
SMAD6O43541 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.59■□□□□ 0.57
SMAD6O43541 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 TSPY22P-201ENST00000427496 604 ntBASIC18.59■□□□□ 0.57
SMAD6O43541 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.59■□□□□ 0.57
SMAD6O43541 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.59■□□□□ 0.57
SMAD6O43541 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.59■□□□□ 0.57
SMAD6O43541 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SMAD6O43541 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SMAD6O43541 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMAD6O43541 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SMAD6O43541 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD6O43541 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD6O43541 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD6O43541 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SMAD6O43541 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD6O43541 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.58■□□□□ 0.57
SMAD6O43541 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD6O43541 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
SMAD6O43541 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
SMAD6O43541 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD6O43541 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.58■□□□□ 0.57
SMAD6O43541 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.58■□□□□ 0.57
SMAD6O43541 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.58■□□□□ 0.57
SMAD6O43541 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD6O43541 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.58■□□□□ 0.57
SMAD6O43541 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SMAD6O43541 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.58■□□□□ 0.56
SMAD6O43541 BX276092.5-203ENST00000456199 560 ntBASIC18.58■□□□□ 0.56
SMAD6O43541 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
SMAD6O43541 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.58■□□□□ 0.56
SMAD6O43541 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
SMAD6O43541 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SMAD6O43541 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.58■□□□□ 0.56
SMAD6O43541 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SMAD6O43541 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD6O43541 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.57■□□□□ 0.56
SMAD6O43541 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.57■□□□□ 0.56
SMAD6O43541 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SMAD6O43541 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD6O43541 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SMAD6O43541 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD6O43541 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SMAD6O43541 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.57■□□□□ 0.56
SMAD6O43541 LINC01126-201ENST00000623515 1646 ntBASIC18.57■□□□□ 0.56
SMAD6O43541 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.57■□□□□ 0.56
SMAD6O43541 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD6O43541 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SMAD6O43541 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SMAD6O43541 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms