Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NDUFS4O43181 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NDUFS4O43181 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NDUFS4O43181 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.68■□□□□ 0.42
NDUFS4O43181 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 TMPOP1-202ENST00000424642 1267 ntBASIC17.68■□□□□ 0.42
NDUFS4O43181 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.68■□□□□ 0.42
NDUFS4O43181 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.68■□□□□ 0.42
NDUFS4O43181 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.68■□□□□ 0.42
NDUFS4O43181 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.68■□□□□ 0.42
NDUFS4O43181 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.68■□□□□ 0.42
NDUFS4O43181 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NDUFS4O43181 AL031432.5-201ENST00000641059 760 ntBASIC17.68■□□□□ 0.42
NDUFS4O43181 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.68■□□□□ 0.42
NDUFS4O43181 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NDUFS4O43181 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS4O43181 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS4O43181 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS4O43181 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFS4O43181 AC117947.1-201ENST00000427448 529 ntBASIC17.67■□□□□ 0.42
NDUFS4O43181 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.67■□□□□ 0.42
NDUFS4O43181 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.67■□□□□ 0.42
NDUFS4O43181 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS4O43181 YBX1P2-201ENST00000489612 999 ntBASIC17.67■□□□□ 0.42
NDUFS4O43181 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.67■□□□□ 0.42
NDUFS4O43181 GCSHP2-201ENST00000560971 527 ntBASIC17.67■□□□□ 0.42
NDUFS4O43181 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.67■□□□□ 0.42
NDUFS4O43181 AC006011.2-201ENST00000621313 1158 ntBASIC17.67■□□□□ 0.42
NDUFS4O43181 AC099343.3-201ENST00000605834 2503 ntBASIC17.67■□□□□ 0.42
NDUFS4O43181 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS4O43181 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS4O43181 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.67■□□□□ 0.42
NDUFS4O43181 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS4O43181 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NDUFS4O43181 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
NDUFS4O43181 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NDUFS4O43181 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.66■□□□□ 0.42
NDUFS4O43181 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 SEC1P-202ENST00000473944 940 ntBASIC17.66■□□□□ 0.42
NDUFS4O43181 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.66■□□□□ 0.42
NDUFS4O43181 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.66■□□□□ 0.42
NDUFS4O43181 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 AC104390.1-201ENST00000555663 520 ntBASIC17.66■□□□□ 0.42
NDUFS4O43181 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NDUFS4O43181 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.66■□□□□ 0.42
NDUFS4O43181 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.66■□□□□ 0.42
NDUFS4O43181 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.66■□□□□ 0.42
NDUFS4O43181 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NDUFS4O43181 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NDUFS4O43181 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NDUFS4O43181 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NDUFS4O43181 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
NDUFS4O43181 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NDUFS4O43181 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms