Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM238LA0A1B0GVL6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.95□□□□□ -0.34
TMEM238LA0A1B0GVL6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TMEM238LA0A1B0GVL6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TMEM238LA0A1B0GVL6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM238LA0A1B0GVL6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC023824.1-201ENST00000562945 2975 ntBASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM238LA0A1B0GVL6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC080080.1-201ENST00000625121 2420 ntBASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 FAM21FP-204ENST00000608637 956 ntBASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 AC061975.6-201ENST00000579045 1553 ntBASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 CICP23-201ENST00000605013 2741 ntBASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM238LA0A1B0GVL6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 NKILA-202ENST00000614771 2598 ntBASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM238LA0A1B0GVL6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms