Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.34□□□□□ -0.27
IGHV4-28A0A0C4DH34 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IGHV4-28A0A0C4DH34 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
IGHV4-28A0A0C4DH34 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IGHV4-28A0A0C4DH34 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
IGHV4-28A0A0C4DH34 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
IGHV4-28A0A0C4DH34 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
IGHV4-28A0A0C4DH34 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 HBZP1-201ENST00000354915 429 ntBASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 PCED1CP-201ENST00000419887 785 ntBASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 FAM86EP-206ENST00000510506 987 ntBASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 AP000550.4-202ENST00000639755 178 ntBASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
IGHV4-28A0A0C4DH34 IER3-202ENST00000376377 1350 ntBASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 AL136038.3-201ENST00000561909 1096 ntBASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC009065.1-201ENST00000564055 1225 ntBASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 AL136038.4-201ENST00000603606 1261 ntBASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 AC005332.1-201ENST00000577698 1310 ntBASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.32□□□□□ -0.28
IGHV4-28A0A0C4DH34 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
IGHV4-28A0A0C4DH34 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms