Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 AL137013.1-201ENST00000432946 1228 ntBASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 AC026271.3-201ENST00000571884 352 ntBASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
DDX49Q9Y6V7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 SLC25A1P4-201ENST00000567977 778 ntBASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 AC130371.2-201ENST00000619443 611 ntBASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 ABALON-201ENST00000629058 1903 ntBASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
DDX49Q9Y6V7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 AC131212.4-201ENST00000623606 975 ntBASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC22.17■■□□□ 1.14
DDX49Q9Y6V7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 SDHAP1-207ENST00000440850 2000 ntBASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 AC011298.2-201ENST00000617989 482 ntBASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 AC006011.2-201ENST00000621313 1158 ntBASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
DDX49Q9Y6V7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DDX49Q9Y6V7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX49Q9Y6V7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC22.15■■□□□ 1.14
DDX49Q9Y6V7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms