Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 AC008550.1-201ENST00000511500 884 ntBASIC17.5■□□□□ 0.39
GPC6Q9Y625 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GPC6Q9Y625 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.5■□□□□ 0.39
GPC6Q9Y625 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GPC6Q9Y625 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 AC004980.1-204ENST00000429707 299 ntBASIC17.49■□□□□ 0.39
GPC6Q9Y625 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.49■□□□□ 0.39
GPC6Q9Y625 RPS2P4-201ENST00000476944 856 ntBASIC17.49■□□□□ 0.39
GPC6Q9Y625 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 AC026271.3-201ENST00000571884 352 ntBASIC17.49■□□□□ 0.39
GPC6Q9Y625 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 CR392000.1-201ENST00000624770 1228 ntBASIC17.49■□□□□ 0.39
GPC6Q9Y625 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 AC073592.3-201ENST00000625118 1834 ntBASIC17.49■□□□□ 0.39
GPC6Q9Y625 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GPC6Q9Y625 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GPC6Q9Y625 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.48■□□□□ 0.39
GPC6Q9Y625 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 PRSS44-201ENST00000515154 1146 ntBASIC17.48■□□□□ 0.39
GPC6Q9Y625 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 AC068587.9-201ENST00000641814 219 ntBASIC17.48■□□□□ 0.39
GPC6Q9Y625 AL031985.4-201ENST00000642138 673 ntBASIC17.48■□□□□ 0.39
GPC6Q9Y625 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 AL354751.1-201ENST00000412768 1863 ntBASIC17.48■□□□□ 0.39
GPC6Q9Y625 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.48■□□□□ 0.39
GPC6Q9Y625 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GPC6Q9Y625 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 MTMR9LP-203ENST00000426597 1545 ntBASIC17.47■□□□□ 0.39
GPC6Q9Y625 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
GPC6Q9Y625 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GPC6Q9Y625 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms