Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 TPM4P1-201ENST00000436100 807 ntBASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA3Q9Y5H0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 AL645929.1-201ENST00000420084 975 ntBASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 NPAP1P7-201ENST00000613027 823 ntBASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 AL691432.3-201ENST00000621860 400 ntBASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA3Q9Y5H0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 AC007613.1-201ENST00000572811 2597 ntBASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 AIRN-201ENST00000601203 4374 ntBASIC17.92■□□□□ 0.46
PCDHGA3Q9Y5H0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms