Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.28□□□□□ -0.28
CHTOPQ9Y3Y2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 LINC02228-204ENST00000642115 2962 ntBASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHTOPQ9Y3Y2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 SLC25A6P5-201ENST00000435663 894 ntBASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 AC131281.2-201ENST00000520478 145 ntBASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CHTOPQ9Y3Y2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 AC023824.1-201ENST00000562945 2975 ntBASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 AC104417.2-201ENST00000562989 1793 ntBASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 MFSD11-216ENST00000590393 1141 ntBASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 AC019069.1-201ENST00000610008 1333 ntBASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 PRAL-201ENST00000624952 3286 ntBASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHTOPQ9Y3Y2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms