Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 CR769767.2-201ENST00000622735 460 ntBASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 NEFHP1-201ENST00000412845 2629 ntBASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VPS9D1Q9Y2B5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 ABALON-201ENST00000629058 1903 ntBASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 KRT18P23-201ENST00000435622 1283 ntBASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
VPS9D1Q9Y2B5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 AL354751.1-201ENST00000412768 1863 ntBASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 MIR3180-4-201ENST00000582223 153 ntBASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 AL390961.4-201ENST00000623958 2535 ntBASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS9D1Q9Y2B5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 OR6D1P-202ENST00000641007 5290 ntBASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 AC093827.2-201ENST00000512654 315 ntBASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS9D1Q9Y2B5 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms