Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHMP2BQ9UQN3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CHMP2BQ9UQN3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 MIR4651-201ENST00000582622 73 ntBASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 MYLKP1-201ENST00000509077 1580 ntBASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 AP000997.3-201ENST00000623333 2250 ntBASIC18.83■□□□□ 0.6
CHMP2BQ9UQN3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 AF186192.3-201ENST00000583427 947 ntBASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 AC130371.2-201ENST00000619443 611 ntBASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHMP2BQ9UQN3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 RPPH1-201ENST00000516869 333 ntBASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 MIR6786-201ENST00000616843 113 ntBASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CHMP2BQ9UQN3 REXO1L9P-201ENST00000604264 2108 ntBASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 AC073195.1-201ENST00000607241 877 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms